This is the new research cluster, running CentOS 7.
It has 47 nodes with 1704 threads of computation. They are interconnected via an Omnipath network. They share access to 874TB of spinning disk drives.
Hardware
| Node count | CPU | CPUs/Cores | Memory | GPU |
|---|---|---|---|---|
| Compute node (x3) | Intel Xeon Silver 4116 | 2×12=24 | 128GB | |
| Compute node (x4) | Intel Xeon Gold 5220 | 2×18=36 | 512GB | |
| Compute node (x1) | Intel Xeon Gold 5220 | 2×18=36 | 256GB | |
| Compute node (x26) | Intel Xeon Gold 5220 | 2×18=36 | 128GB | |
| Compute node (x8) | Intel Xeon Gold 5220 | 2×18=36 | 64GB | |
| GPU node (x1) | Intel Xeon Gold 5220R | 2×18=36 | 256GB | RTX A4000 (x2, 16GB) |
| GPU node (x2) | Intel Xeon Gold 5220R | 2×24=48 | 384GB | A100 (x2, 40GB) |
| GPU node (x1) | Intel Xeon Gold 5220R | 2×24=48 | 768GB | A100 (x4, 40GB) |
Software
Compilers: GCC/G++/gfortran; Intel C/C++; Java
Cluster libraries: OpenMPI, mpich2, mpich3
Statistics: R, SAS
Bioinformatics: bedtools, blast, bowtie2, fasttree, GroopM, SAMTools, R-Bioconductor, TopHat, Trimmomatic and others
Geology:cmocean, euclid, geopandas, GMT, GMTSAR, obspy, StAMPS and others
Astronomy:astropy, CARTA, ciao and others
Chemistry:Gaussian, GULP, LAMMPS, PLUMED, QuantumESPRESSO and others
Additional software available upon request.